Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs17125310 chr1:64157197 C/G 5.65E-5 258 32.6 28.53 9.47 KM Plot
SARC rs17138987 chr16:6016046 A/G 2.64E-11 258 4.27 27.1 32.3 KM Plot
SARC rs17160866 chr11:70279927 G/A 5.76E-6 247 31.97 35.67 18.8 KM Plot
SARC rs17177275 chr12:4913712 G/C 0 251 33.9 25.7 0.57 KM Plot
SARC rs174750 chr1:182431098 G/T 1.51E-7 255 31.1 36.27 6.72 KM Plot
SARC rs174843 chr1:182449420 G/T 1.32E-7 258 30.93 35.77 6.72 KM Plot
SARC rs1839098 chr16:35139485 A/G 1.81E-7 258 8.73 34.77 31.97 KM Plot
SARC rs184172684 chr3:52970504 C/CT 2.42E-14 253 30.85 34.57 1.17 KM Plot
SARC rs1862045 chr7:134023412 A/G 7.98E-5 252 32.4 30.93 21 KM Plot
SARC rs1862046 chr7:134023524 T/C 4.48E-5 249 32.4 31.1 21 KM Plot
SARC rs1865837 chr16:46655516 C/G 0 258 1.07 23.35 33.2 KM Plot
SARC rs1912484 chr17:45443664 C/G 2.72E-5 253 19.97 34 31.97 KM Plot
SARC rs1912485 chr17:45515678 T/G 9.98E-5 257 19.97 34 32.4 KM Plot
SARC rs1912486 chr17:45515167 A/G 9.98E-5 257 19.97 34 32.4 KM Plot
SARC rs1918827 chr16:86456113 A/G 0 258 32.4 30.72 1.07 KM Plot